Martin Miller (cbio.mskcc.org/people/info/martin_miller.html) talks about visualization of proteome data with particular emphasis on modeling phosphorylation sites. He gives a brief introduction into different methods for the analysis of the single cell proteome from antibody-based methods to mass spectrometry and fluorescence tagging. With the onset of targeted and shot-gun mass spectrometry, there is an increasing amount of proteomics data which will need to be classified, integrated and available for analysis in a meaningful and accessible manner. This talk was presented at VIZBI 2013, an international conference series on visualizing biological data (vizbi.org). This video was filmed and distributed with permission under a Creative Commons license.