In this series of screencasts we are repeating analyses demonstrated by Trapnell et al. in their 2012 Nature Protocols Paper ( In this screencast we are performing the following operations:

0:13 - Pulling data from CuffDiff output
1:20 - Generating a list of differentially expressed transcrips
3:15 - Plotting CuffDiff data with Cummerbund

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Galaxy Project Plus

A collection of screencasts explaining to to manipulate the Next Generation Sequencing (NGS) data in Galaxy. It is a companion to our wiki page at

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