Basic Protocol 1: Finding Human Coding Exons with Highest SNP Density
This protocol demonstrates a data analysis method to answer a specific biological question. Using external data accessible to and tools entirely contained within Galaxy, large datasets are compared and manipulated to complete the data reduction and then visualized. Extraction from the UCSC Table Browser, Interval Operations, Sorting, Text Manipulations, and a supplemental Galaxy Track Browser (Trackster) visualization are included.

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CPB UsingGalaxy

Galaxy Project Plus

Using Galaxy to Perform Large-Scale Interactive Data Analysis: A live supplement
Jennifer Hillman-Jackson,1 Dave Clements,2 Daniel Blankenberg,1 James Taylor,2 Anton Nekrutenko,1 and the Galaxy Team1,2
1Penn State University, University Park, Pennsylvania…


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Using Galaxy to Perform Large-Scale Interactive Data Analysis: A live supplement
Jennifer Hillman-Jackson,1 Dave Clements,2 Daniel Blankenberg,1 James Taylor,2 Anton Nekrutenko,1 and the Galaxy Team1,2
1Penn State University, University Park, Pennsylvania
2Emory University, Atlanta, Georgia
usegalaxy.org/u/galaxyproject/p/using-galaxy-2012

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