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  1. Annotation

    00:51

    from RappsilberLab Added 12 0 0

    How to pick different annotation types to highlight in protein representations

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    • CLMS-UI - 3D NGL View

      02:35

      from RappsilberLab Added 23 0 0

      Brief display of the capabilities of the 3D NGL view overlaid with crosslink data

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      • CLMS-UI - Accessing the Spectrum View

        00:25

        from RappsilberLab Added 9 0 0

        Selecting and brushing crosslinks is mirrored between views, and selecting crosslinks populates the match table which can be used to access spectra

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        • CLMS-UI - Alignment View

          00:56

          from RappsilberLab Added 3 0 0

          Viewing alignments withing CLMS-UI

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          • CLMS-UI - Brief Intro

            00:51

            from RappsilberLab Added 35 0 0

            Brief Description of the separate parts of the CLMS User Interface

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            • CLMS-UI - Circular View, Basic Interactions

              00:44

              from RappsilberLab Added 11 0 0

              Showing the basic interactions on a circular view for a single protein search (not much)

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              • CLMS-UI - Distogram

                01:10

                from RappsilberLab Added 11 0 0

                The distogram shows the aggregated distances of crosslinks,with random and decoy data added for comparison

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                • CLMS-UI - Export Filtered Data as CSV files

                  00:55

                  from RappsilberLab Added 9 0 0

                  Filtered crosslink data can be exported as csv files at various resolutions - matches, crosslinks or residue data

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                  • CLMS-UI - Export Images

                    00:51

                    from RappsilberLab Added 7 0 0

                    How to export images as .SVG or .PNG files for use in figures

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                    • CLMS-UI - Legend View

                      01:45

                      from RappsilberLab Added 8 0 0

                    • CLMS-UI - Loading PDB Data

                      00:54

                      from RappsilberLab Added 7 0 0

                      How to load a PDB File into the CLMS Visualisation

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                      • CLMS-UI - Main View, Basic Interactions

                        01:17

                        from RappsilberLab Added 16 0 0

                        Basic interactions of the main CLMS-UI view on a single protein search

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