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  1. PP - Getting Started / Simple Search


    from Robert Chalkley Added 5,535 2 0

    In this tutorial I explain how to set up a user account and complete a simple search using Batch-Tag Web.

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    • Protein Prospector - MS-Viewer


      from Robert Chalkley Added 2,722 0 0

      This tutorial describes the use of MS-Viewer, a free spectral viewer that is part of the Protein Prospector package of proteomic analysis tools. It allows viewing of results from Protein Prospector…

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      • Protein Prospector: Cross-linked Peptide Analysis


        from Robert Chalkley Added 2,113 0 0

        This tutorial describes how to use Protein Prospector to identify cross-linked peptides. A more complete description of the software can be found in the publication: Mol Cell Proteomics (2014) 13…

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        • MSViewer Update


          from Robert Chalkley Added 1,096 0 0

          This is an updated tutorial describing features that have been added to MS-Viewer in the last couple of years. Many of these features are described in more detail in the following publication: Mol…

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          • PP - Unknown Mass Modification Searching


            from Robert Chalkley Added 918 0 0

            This tutorial describes how it is possible using Batch-Tag in Protein Prospector to identify unanticipated/unpredicted peptide modifications.

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            • PP - Search Compare / Viewing Results


              from Robert Chalkley Added 787 0 0

              In this tutorial I describe the various filtering and viewing parameters available in Search Compare for analyzing your MSMS database search results.

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              • Installing the Basic Version of Protein Prospector on Windows 7


                from Robert Chalkley Added 528 0 0

                This tutorial walks you through the installation of the basic version of Protein Prospector (version that does does not support batch MSMS analysis: most simple to install) on Windows 7.

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                • PP - Site Assignment (SLIP) Scoring


                  from Robert Chalkley Added 377 0 0

                  In this tutorial we describe modification site assignment (SLIP) scoring integrated into Protein Prospector. Using this, a reliability score is reported for all modification assignments. We explain…

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                  Videos Robert Chalkley

                  Here are all of the videos that Robert Chalkley has uploaded to Vimeo. Appearances are videos that Robert Chalkley has been credited in by others.

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