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  1. PP - Getting Started / Simple Search

    06:20

    from Robert Chalkley Added 43.2K 1 0

    In this tutorial I explain how to set up a user account and complete a simple search using Batch-Tag Web.

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    • Protein Prospector - MS-Viewer

      14:49

      from Robert Chalkley Added 2,016 0 0

      This tutorial describes the use of MS-Viewer, a free spectral viewer that is part of the Protein Prospector package of proteomic analysis tools. It allows viewing of results from Protein Prospector…

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      • Protein Prospector: Cross-linked Peptide Analysis

        18:14

        from Robert Chalkley Added 1,490 0 0

        This tutorial describes how to use Protein Prospector to identify cross-linked peptides. A more complete description of the software can be found in the publication: Mol Cell Proteomics (2014) 13…

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        • MSViewer Update

          17:22

          from Robert Chalkley Added 760 0 0

          This is an updated tutorial describing features that have been added to MS-Viewer in the last couple of years. Many of these features are described in more detail in the following publication: Mol…

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          • PP - Unknown Mass Modification Searching

            12:08

            from Robert Chalkley Added 662 0 0

            This tutorial describes how it is possible using Batch-Tag in Protein Prospector to identify unanticipated/unpredicted peptide modifications.

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            • PP - Search Compare / Viewing Results

              18:24

              from Robert Chalkley Added 570 0 0

              In this tutorial I describe the various filtering and viewing parameters available in Search Compare for analyzing your MSMS database search results.

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              • PP - Site Assignment (SLIP) Scoring

                10:39

                from Robert Chalkley Added 297 0 0

                In this tutorial we describe modification site assignment (SLIP) scoring integrated into Protein Prospector. Using this, a reliability score is reported for all modification assignments. We explain…

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                • Installing the Basic Version of Protein Prospector on Windows 7

                  06:22

                  from Robert Chalkley Added 268 0 0

                  This tutorial walks you through the installation of the basic version of Protein Prospector (version that does does not support batch MSMS analysis: most simple to install) on Windows 7.

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                  Videos Robert Chalkley

                  Here are all of the videos that Robert Chalkley has uploaded to Vimeo. Appearances are videos that Robert Chalkley has been credited in by others.

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